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    GeneDoc: DNA editing, alignment, analyser and shading software

    25th June 2007

    Full Featured Multiple Sequence Alignment Editor, Analyser and Shading Utility for Windows.

    Small and convenient. Can do sequence alignments (I recommend to limit the length to 2kb for alignments).

    Latest version I found: updated July, 2001, GeneDoc version # 2.6.02.

    Drawback: windows only (but has GNU-licence sources).

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    2 Responses to “GeneDoc: DNA editing, alignment, analyser and shading software”

    1. FATIMA Says:

      >A.tumefaciens_CCNWNX0078_EU697966.1
      TGCAAGTCGAACGCCCCGCAAGGGGAGTGGCAGACGGGTGAGTAACGCGTGGGAACATAC
      CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
      AAGATTTATCGGGGAAGGATTGGCCCGCGTTGGATTAGCTAGTTGG
      TGGGGTAAAGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACA
      TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
      GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCT
      CTTTCACCGGAGAAGATAATGACGGTATCCGGAGA
      AGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTT
      CGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATATTTAAGTCAGGGGTGAAATCCCAG
      AGCTCAACTCTGGAACTGCCTTTGATACTGGGTATCTTGAGTATGGAAGAGGTAAGTGGA
      ATTCCGAGTGTAGAGGTGAAATTCG
      >IEC10 .
      gGggaGTGGCAgACGGGTGAgtaACgCGTGGGAACAtAC
      CCTTTCCtGCggAAtAgCTCCgGgAAACTGGaaTTAATACCGCaTACgCCCtACGGGGGA
      AAGATttATCGgGGAAgGAtTGGCCCGCgtTGGatTAgCTAgttGG
      tGGGGTAAAGGCCTACCAagGCGACgATCCATAgCTGGtCTGAgAgGATGAtCAgCCACa
      TTGGGACTGAGACACGGCCCAaACTCCTACGGGAGGCAgCAgTGGGGAATATTGgACAAT
      GggCGCAaGCCTgATCCAgCCATGCCGCGTGAGTGATGAAgGCCTTAgGGTTGTAAAGCT
      CTTTCACCGGAgAAgATAATGACGgTATCCGgAgA
      AgAAGCCCCGGCTAACTTCGtGCCAgCAGCCGCgGtAATACGAAgGGgGCTAgCGTTGTT
      CggAATTACTGg
      >IRC61 .
      GCAAGGGGAGTGGCAgACGGGTGAgTAACGCGTGGGAACATAC
      CCttTCCTGCGGAATAGCTCCGGGAAACTGGAaTTAATACCGCaTACGCCCTACGGGGGA
      AAGAttTATCGGGGAAGGAtTGGCCCGCgttGGATTAgCTAGtTGG
      tGGGGtAAAGGCCTACCAAGGCGACgATCCATAgCTGGtCTGAgAGGATGATCAGCCACa
      TTGGGACTGAgACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATAttGGACAAT
      GGGCGCAaGCCTGATCCAgCCATGCCGCGtGAGtGATGAAgGCCTTAgGGtTGTAAAGCT
      CTTTCACCGGAgAAgATAATGACGGtaTCCGGAgA
      AgAAGCCcCGGCTAACTTCGtGCcAgCAGCCGCGGtAATACGAAGggGGCTAGCGTTgTT
      CGgAATtACTGgGCGTAaAGCGCACGTAgGCGgATATtTAAgTCAgGgGtGAaATcCCAg
      AgCTCAaCtCTGgaACTGCCtTTgATACTGgGtATCTTg
      >A.tumefaciens_B5_EF661856.1
      TGCAAGTCGAACGCCCCGCAAGGGGAGTGGCAGACGGGTGAGTAACGCGTGGGAACATAC
      CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
      AAGATTTATCGGGGAAGGATTGGCCCGCGTTGGATTAGCTAGTTGG
      TGGGGTAAAGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACA
      TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
      GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCT
      CTTTCACCGATGAAGATAATGACGGTAGTCGGAGA
      AGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTT
      CGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATATTTAAGTCAGGGGTGAAATCCCGC
      AGCTCAACTGCGGAACTGCCTTTGATACTGGGTATCTTGAGTATGGAAGAGGTAAGTGGA
      ATTCCGAGTGTAGAGGTGAAATTCG
      >RCM12 .
      ACGGGTGAgtAACGCGTGGGAACATAC
      CCTTTCCTGCGGAATAgCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
      AAGATTTATCGGGGAAGGATTGGCCCGCGtTGGATTAGCTAGTTGG
      TGGGGTAAAGGCCTACCAAGGCGACGATCCATAgCTGGtCtGAGAGGATGATCAGCCACA
      TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
      GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAgTGATGAAGGCCTTAgGGTTGTAAAGCT
      CTTTCACCGATGAAgATAATGACGGTAGTCGGAgA
      AgAAGCCCCGGCTAACTTCGTGCCAgCAGCCGCGGTAATACGAAgGGGGCTAGCGTTGTT
      CgGaATTACTGGGCGt
      >RCM3mod .
      ACGGGTGAgtAACGCGTGGGAACATAC
      CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
      AAGATTTATCGGGGAAGGATTGGCCCGCGtTGGATTAGCTAGTTGG
      TGGGGTAAAGGCCTACCAAGGCGACGATCCATAgCTGGtCtGAGAGGATGATCAGCCACA
      TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
      GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAgTGATGAAGGCCTTAgGGTTGTAAAGCT
      CTTTCACCGATGAAgATAATGACGGTAGTCGGAgA
      AgAAGCCCCGGCTAACTTCGTGCCAgCAGCCGCGGTAATACGAAgGGGGCTAGCGTTGTT
      CgGnATTACTGGGCGt
      >RCM9mod .
      AACGCCCCGCaaGGGGAGTGGCAGACGGGTGAGTAACGCGTGGGAACATAC
      CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
      AAGATTTATCGGGGAAGGATTGGCCCGCGTTGGATTAGCTAGTTGG
      TGGGGTAAAGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACA
      TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
      GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCT
      CTTTCACCGATGAAGATAATGACGGTAGTCGGAGA
      AGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAgGGGGCTAGCGTTGTT
      CGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATATTTAAGTCAGGGGTGAAATCCCGC
      AGCTCAaCTGCGGAACTGCCTTTGATACTGGGTATCTTGAGTATGGAAGAGGTAAGTGGA
      ATTCC
      >IRC43 .
      TCgAACgCCCCGCAaGGGGAGTGGCAgACGGGTGAgTAACGCGTGGGAACATAC
      CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
      AAGATTTATCGGGGAAGGATTGGCCCGCGTTGGAtTAGCTAGtTGG
      tGGGGTAAAGGCCTACCAAGGCGACGATCCATAgCtGGtCtGAgAGGATGATCAGCCACA
      TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
      GGGCGCAaGCCTGATCCAgCCATGCCGCGtGAGTGATGAAgGCCTTAgGGTTGTAAAGCT
      CTTTCACCGATGAAgATAATGACGGTAGTCGGAgA
      AgAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAgGGGGCTAGCGTTGTT
      CGGAATTACTGgGCGTAaAGCGCACGTAgGCGgATATTtAAGTCAgGGGTGAAATCCCGC
      AGCTCAaCTGCGgAaCTGCCTTTGATACTGgGTATCTTGA
      >IRC51 .
      TGCaAgTCgAACGCCCCGCAAGGGGAGTGGCAGACGGGTGAGTAACGCGTGGGAACATAC
      CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
      AAGaTTTATCGGGGAAGGATTGGCCCGCGTTGGATTAGCTAGTTGG
      TGGGGTAAAGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACA
      TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
      GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCT
      CTTTCACCGATGAAGATAATGACGGTAGTCGGAGA
      AGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTT
      CGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATATTTAAGTCAgGGGTGAAATCCCGC
      AGCTCAaCTGCGGAACTGCCTTTGATACTGGGTATCTTGAGTaTGGAAGAGGTAAGTGGA
      ATTCCGAGTgTAGAGgTGAAATTCg

      >IEC4mod

      >AgAgAAgCTTGCTTCTcTTGAgAGCGGCGGACGGgTGAgTAATGCCTAgGAaTCTGC
      CtGgtagTGGGGgnnnACgtTCGGAAACGGACgCTAATACCGCATACgTCCTACGGGAgA
      AAGCAGGGGACCTTCGGGCCTTGCgCTATCAGATGAGCCTAgGTCGGATTAGCTAGtTGG
      tGGGGTAATGGCTCACCAAGGCGACGATCCGTAaCTGGtCTGAgAgGATGATCAGTCACA
      CTGGAACTGAgACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
      GGGCGAAAGCCTGATCCAgCCATGCCGCGTGTGTGAAGAAgGTCTTCGgATTGTAAAGCA
      CTTTAAGTTGGgAgGAAGGGCAGTTACCTAATACGTAATTGTTtTGACGTTACCGACAGA
      ATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGtAATACAgAGGGTGCAAGCGTTAAT
      CGgAATTACTGgG
      >IRC1 .

      >AgAgAAgCTTGCTTCTCTTGagAgCGGCGGaCGGgTGAgTAAtGCCTAgGAAtCtGC
      CtGGtAgTGGgggatAACgttCgGAAACGGACgCTAATACCGCATACgTCCTACGGGAGA
      AAGCAGGGGACCTTCgGGCCTTGCgCTATCAGATGAgCCTAgGtCGGATTAgCTAGtTGG
      tGGGGTAATGGCTCACCAagGCGACGATCCGTAaCTGGtCTGAgAgGATGATCAgTCACA
      CTGGAACTGAgACACGGTCCAgACTCCTACGGGAGGCAgCAGTGGGGAATATTGGACAAT
      GGgCGAAAGCCTGATCCAgCCATGCCGCGTGTGtGAAGAAgGTCTTCggATTGtAAAGCA
      CTTTAAGTTGGgAgGAAGGGCAgTTACCTAATACGTAATTGTTTTGACGTTACCGACAgA
      ATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAgAgGGTGCAAGCGTTAAT
      CGGAATTACTgGGCGTaAAGCgCgCG

      >pseudomonas poas
      >TAGAGAGAAGCTTGCTTCTCTTGAGAGCGGCGGACGGGTGAGTAATGCCTAGGAATCTGC
      CTGGTAGTGGGGGATAACGTTCGGAAACGGACGCTAATACCGCATACGTCCTACGGGAGA
      AAGCAGGGGACCTTCGGGCCTTGCGCTATCAGATGAGCCTAGGTCGGATTAGCTAGTTGG
      TGGGGTAATGGCTCACCAAGGCGACGATCCGTAACTGGTCTGAGAGGATGATCAGTCACA
      CTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
      GGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGTCTTCGGATTGTAAAGCA
      CTTTAAGTTGGGAGGAAGGGCAGTTACCTAATACGTAATTGTTTTGACGTTACCGACAGA
      ATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAAT
      CGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTTGTTAAGTTGGATGTGAAATCCCCG
      GGCTCAACCTGGGAACTGCATTCAAAACTGACTGACTAGAGTATGGTAGA

    2. Bogdan Says:

      yes, these could be edited with GeneDoc :)

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