Comments on: GeneDoc: DNA editing, alignment, analyser and shading software https://bogdan.org.ua/2007/06/25/genedoc-dna-editing-alignment-analyser-and-shading-software.html Tiny bits of bioinformatics, [web-]programming etc Mon, 01 Jan 2024 17:12:20 +0000 hourly 1 https://wordpress.org/?v=3.8.27 By: Bogdanhttps://bogdan.org.ua/2007/06/25/genedoc-dna-editing-alignment-analyser-and-shading-software.html#comment-92381 Fri, 12 Dec 2008 22:46:36 +0000 http://bogdan.org.ua/2007/06/25/genedoc-dna-editing-alignment-analyser-and-shading-software.html#comment-92381 yes, these could be edited with GeneDoc :)

]]> By: FATIMAhttps://bogdan.org.ua/2007/06/25/genedoc-dna-editing-alignment-analyser-and-shading-software.html#comment-92345 Fri, 12 Dec 2008 16:15:42 +0000 http://bogdan.org.ua/2007/06/25/genedoc-dna-editing-alignment-analyser-and-shading-software.html#comment-92345 >A.tumefaciens_CCNWNX0078_EU697966.1
TGCAAGTCGAACGCCCCGCAAGGGGAGTGGCAGACGGGTGAGTAACGCGTGGGAACATAC
CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
AAGATTTATCGGGGAAGGATTGGCCCGCGTTGGATTAGCTAGTTGG
TGGGGTAAAGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACA
TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCT
CTTTCACCGGAGAAGATAATGACGGTATCCGGAGA
AGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTT
CGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATATTTAAGTCAGGGGTGAAATCCCAG
AGCTCAACTCTGGAACTGCCTTTGATACTGGGTATCTTGAGTATGGAAGAGGTAAGTGGA
ATTCCGAGTGTAGAGGTGAAATTCG
>IEC10 .
gGggaGTGGCAgACGGGTGAgtaACgCGTGGGAACAtAC
CCTTTCCtGCggAAtAgCTCCgGgAAACTGGaaTTAATACCGCaTACgCCCtACGGGGGA
AAGATttATCGgGGAAgGAtTGGCCCGCgtTGGatTAgCTAgttGG
tGGGGTAAAGGCCTACCAagGCGACgATCCATAgCTGGtCTGAgAgGATGAtCAgCCACa
TTGGGACTGAGACACGGCCCAaACTCCTACGGGAGGCAgCAgTGGGGAATATTGgACAAT
GggCGCAaGCCTgATCCAgCCATGCCGCGTGAGTGATGAAgGCCTTAgGGTTGTAAAGCT
CTTTCACCGGAgAAgATAATGACGgTATCCGgAgA
AgAAGCCCCGGCTAACTTCGtGCCAgCAGCCGCgGtAATACGAAgGGgGCTAgCGTTGTT
CggAATTACTGg
>IRC61 .
GCAAGGGGAGTGGCAgACGGGTGAgTAACGCGTGGGAACATAC
CCttTCCTGCGGAATAGCTCCGGGAAACTGGAaTTAATACCGCaTACGCCCTACGGGGGA
AAGAttTATCGGGGAAGGAtTGGCCCGCgttGGATTAgCTAGtTGG
tGGGGtAAAGGCCTACCAAGGCGACgATCCATAgCTGGtCTGAgAGGATGATCAGCCACa
TTGGGACTGAgACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATAttGGACAAT
GGGCGCAaGCCTGATCCAgCCATGCCGCGtGAGtGATGAAgGCCTTAgGGtTGTAAAGCT
CTTTCACCGGAgAAgATAATGACGGtaTCCGGAgA
AgAAGCCcCGGCTAACTTCGtGCcAgCAGCCGCGGtAATACGAAGggGGCTAGCGTTgTT
CGgAATtACTGgGCGTAaAGCGCACGTAgGCGgATATtTAAgTCAgGgGtGAaATcCCAg
AgCTCAaCtCTGgaACTGCCtTTgATACTGgGtATCTTg
>A.tumefaciens_B5_EF661856.1
TGCAAGTCGAACGCCCCGCAAGGGGAGTGGCAGACGGGTGAGTAACGCGTGGGAACATAC
CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
AAGATTTATCGGGGAAGGATTGGCCCGCGTTGGATTAGCTAGTTGG
TGGGGTAAAGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACA
TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCT
CTTTCACCGATGAAGATAATGACGGTAGTCGGAGA
AGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTT
CGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATATTTAAGTCAGGGGTGAAATCCCGC
AGCTCAACTGCGGAACTGCCTTTGATACTGGGTATCTTGAGTATGGAAGAGGTAAGTGGA
ATTCCGAGTGTAGAGGTGAAATTCG
>RCM12 .
ACGGGTGAgtAACGCGTGGGAACATAC
CCTTTCCTGCGGAATAgCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
AAGATTTATCGGGGAAGGATTGGCCCGCGtTGGATTAGCTAGTTGG
TGGGGTAAAGGCCTACCAAGGCGACGATCCATAgCTGGtCtGAGAGGATGATCAGCCACA
TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAgTGATGAAGGCCTTAgGGTTGTAAAGCT
CTTTCACCGATGAAgATAATGACGGTAGTCGGAgA
AgAAGCCCCGGCTAACTTCGTGCCAgCAGCCGCGGTAATACGAAgGGGGCTAGCGTTGTT
CgGaATTACTGGGCGt
>RCM3mod .
ACGGGTGAgtAACGCGTGGGAACATAC
CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
AAGATTTATCGGGGAAGGATTGGCCCGCGtTGGATTAGCTAGTTGG
TGGGGTAAAGGCCTACCAAGGCGACGATCCATAgCTGGtCtGAGAGGATGATCAGCCACA
TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAgTGATGAAGGCCTTAgGGTTGTAAAGCT
CTTTCACCGATGAAgATAATGACGGTAGTCGGAgA
AgAAGCCCCGGCTAACTTCGTGCCAgCAGCCGCGGTAATACGAAgGGGGCTAGCGTTGTT
CgGnATTACTGGGCGt
>RCM9mod .
AACGCCCCGCaaGGGGAGTGGCAGACGGGTGAGTAACGCGTGGGAACATAC
CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
AAGATTTATCGGGGAAGGATTGGCCCGCGTTGGATTAGCTAGTTGG
TGGGGTAAAGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACA
TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCT
CTTTCACCGATGAAGATAATGACGGTAGTCGGAGA
AGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAgGGGGCTAGCGTTGTT
CGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATATTTAAGTCAGGGGTGAAATCCCGC
AGCTCAaCTGCGGAACTGCCTTTGATACTGGGTATCTTGAGTATGGAAGAGGTAAGTGGA
ATTCC
>IRC43 .
TCgAACgCCCCGCAaGGGGAGTGGCAgACGGGTGAgTAACGCGTGGGAACATAC
CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
AAGATTTATCGGGGAAGGATTGGCCCGCGTTGGAtTAGCTAGtTGG
tGGGGTAAAGGCCTACCAAGGCGACGATCCATAgCtGGtCtGAgAGGATGATCAGCCACA
TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
GGGCGCAaGCCTGATCCAgCCATGCCGCGtGAGTGATGAAgGCCTTAgGGTTGTAAAGCT
CTTTCACCGATGAAgATAATGACGGTAGTCGGAgA
AgAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAgGGGGCTAGCGTTGTT
CGGAATTACTGgGCGTAaAGCGCACGTAgGCGgATATTtAAGTCAgGGGTGAAATCCCGC
AGCTCAaCTGCGgAaCTGCCTTTGATACTGgGTATCTTGA
>IRC51 .
TGCaAgTCgAACGCCCCGCAAGGGGAGTGGCAGACGGGTGAGTAACGCGTGGGAACATAC
CCTTTCCTGCGGAATAGCTCCGGGAAACTGGAATTAATACCGCATACGCCCTACGGGGGA
AAGaTTTATCGGGGAAGGATTGGCCCGCGTTGGATTAGCTAGTTGG
TGGGGTAAAGGCCTACCAAGGCGACGATCCATAGCTGGTCTGAGAGGATGATCAGCCACA
TTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
GGGCGCAAGCCTGATCCAGCCATGCCGCGTGAGTGATGAAGGCCTTAGGGTTGTAAAGCT
CTTTCACCGATGAAGATAATGACGGTAGTCGGAGA
AGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTT
CGGAATTACTGGGCGTAAAGCGCACGTAGGCGGATATTTAAGTCAgGGGTGAAATCCCGC
AGCTCAaCTGCGGAACTGCCTTTGATACTGGGTATCTTGAGTaTGGAAGAGGTAAGTGGA
ATTCCGAGTgTAGAGgTGAAATTCg

>IEC4mod

>AgAgAAgCTTGCTTCTcTTGAgAGCGGCGGACGGgTGAgTAATGCCTAgGAaTCTGC
CtGgtagTGGGGgnnnACgtTCGGAAACGGACgCTAATACCGCATACgTCCTACGGGAgA
AAGCAGGGGACCTTCGGGCCTTGCgCTATCAGATGAGCCTAgGTCGGATTAGCTAGtTGG
tGGGGTAATGGCTCACCAAGGCGACGATCCGTAaCTGGtCTGAgAgGATGATCAGTCACA
CTGGAACTGAgACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
GGGCGAAAGCCTGATCCAgCCATGCCGCGTGTGTGAAGAAgGTCTTCGgATTGTAAAGCA
CTTTAAGTTGGgAgGAAGGGCAGTTACCTAATACGTAATTGTTtTGACGTTACCGACAGA
ATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGtAATACAgAGGGTGCAAGCGTTAAT
CGgAATTACTGgG
>IRC1 .

>AgAgAAgCTTGCTTCTCTTGagAgCGGCGGaCGGgTGAgTAAtGCCTAgGAAtCtGC
CtGGtAgTGGgggatAACgttCgGAAACGGACgCTAATACCGCATACgTCCTACGGGAGA
AAGCAGGGGACCTTCgGGCCTTGCgCTATCAGATGAgCCTAgGtCGGATTAgCTAGtTGG
tGGGGTAATGGCTCACCAagGCGACGATCCGTAaCTGGtCTGAgAgGATGATCAgTCACA
CTGGAACTGAgACACGGTCCAgACTCCTACGGGAGGCAgCAGTGGGGAATATTGGACAAT
GGgCGAAAGCCTGATCCAgCCATGCCGCGTGTGtGAAGAAgGTCTTCggATTGtAAAGCA
CTTTAAGTTGGgAgGAAGGGCAgTTACCTAATACGTAATTGTTTTGACGTTACCGACAgA
ATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAgAgGGTGCAAGCGTTAAT
CGGAATTACTgGGCGTaAAGCgCgCG

>pseudomonas poas
>TAGAGAGAAGCTTGCTTCTCTTGAGAGCGGCGGACGGGTGAGTAATGCCTAGGAATCTGC
CTGGTAGTGGGGGATAACGTTCGGAAACGGACGCTAATACCGCATACGTCCTACGGGAGA
AAGCAGGGGACCTTCGGGCCTTGCGCTATCAGATGAGCCTAGGTCGGATTAGCTAGTTGG
TGGGGTAATGGCTCACCAAGGCGACGATCCGTAACTGGTCTGAGAGGATGATCAGTCACA
CTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAAT
GGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGTCTTCGGATTGTAAAGCA
CTTTAAGTTGGGAGGAAGGGCAGTTACCTAATACGTAATTGTTTTGACGTTACCGACAGA
ATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAAT
CGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTTGTTAAGTTGGATGTGAAATCCCCG
GGCTCAACCTGGGAACTGCATTCAAAACTGACTGACTAGAGTATGGTAGA

]]>