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CLANS: CLuster ANalysis of Sequences

25th October 2008

CLANS (CLuster ANalysis of Sequences).

Found via Freelancing science:

CLANS runs (PSI)BLAST on your sequences, all vs all, and clusters them in 2D or 3D according to their similarity. This method allows for rapid classification of huge datasets and has the advantage over, lets say, phylogenetic tree, that one can quickly assess results of the clustering in a visual way (I cannot imagine making any sense of looking at phylogenetic tree with 1500 branches, while the graphical output, as on the animation below, is pretty easy to read).

This entry was posted on Saturday, October 25th, 2008 at 1:20 and is filed under Bioinformatics, Links, Science. You can follow any responses to this entry through the RSS 2.0 feed. You can skip to the end and leave a response. Pinging is currently not allowed.

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