There are several ways to do that, I’ll describe the one which worked for me. Please note, that printing from CLI has an advantage of being able to print out something at work from the comfort of your home and ssh (provided that the printer is on and is loaded with paper).

To extract a single page (or a range of pages), I used pdftops:
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For some period of time, I had to switch to my Windows installation when writing articles with references, because I keep my references database there and there is an extremely convenient add-on for MS Office to insert citations and format bibliography on the fly.

However, it is quite inconvenient to make/run programs/scripts under Linux, and then switch to Windows to describe the obtained results in the article-like form. Thus, I briefly investigated available citation managers for Linux.
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I love Debian, too.

Though I prefer ‘testing’ (which is currently codenamed Lenny) over ’stable’ (aka Etch).

If you get Segmentation fault when trying to run fgl_glxgears in your Debian desktop environment, most often this would mean that 3D acceleration isn’t enabled.

For the case of ATI (and ATI Mobility) Radeon series, the easiest procedure would be (doing all as root, or prepending sudo to all commands):

1. aptitude update, to ensure you’ve got the list of latest packages
2. aptitude install fglrx-driver fglrx-control fglrx-kernel-src, for the actual driver; I also installed fglrx-atieventsd and fglrx-glx (these are driver-recommended packages)
3. aptitude install module-assisstant, required for building the kernel module
4. module-assistant prepare, to verify that you have everything needed for the module build procedure
5. module-assistant update
6. module-assistant auto-install fglrx, to build and install the fglrx kernel module
7. depmod -a
8. modprobe fglrx, to load the fglrx kernel module
9. aticonfig ––initial, to configure ATI’s device section in /etc/X11/xorg.conf (for more options, see aticonfig ––help)
10. reboot

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To cut the long story short: for the final evaluation, I had this line of control panels:

• SysCP
• Domain Technologie Control, DTC
• Virtualmin (also Webmin, Usermin)
• ISPConfig
• RavenCore
• GNUPanel

SysCP: looks good to me (they have a working demo), has customer billing module. Unsure as to where it is used, but most probably sponsors are also the users of SysCP. Majority of support forums is in German.

DTC: has no demo, only some screenshots. Has a set of packages for Debian lenny (which is a huge plus for maintenance and future upgrades). DTC is being developed by GPLHost, and is also used by GPLHost - so this is a live (used) distribution. Seems quite feature-rich.

Virtualmin claims to be the “world’s most powerful and flexible web server control panel”. Virtualmin offers 4 means to control it: Web, mobile device, command line, and remote API. There are both screenshots and demo. Has both GPL and Professional versions. GPL version has a number of limitations, comparing to Pro version. From what I’ve read about Webmin (all three - Virtualmin, Webmin, Usermin - are just different “layers” of server control), it is a framework with a number of “interface scripts”, which allow to control various services. As such, it is easily extendible, but is not monolithic - in the sense of module inter-dependencies and action triggers.

RavenCore, if it had a working demo, could be an option. It seems to be quite actively developed, but all the screenshots are outdated, and demo isn’t working. However, based on what I’ve read, at least some people seem to be satisfied with this CP.

GNUPanel is a year-old control panel, but has a news item on the front page (dated August, 17) promising new, completely rewritten release somewhere in October. By the feature list, looks promising. However, I need the panel right now, and even in October, that will be quite a rough release, not really used/tested anywhere, so not a good option as well. But GNUPanel is a panel to check in half a year for progress.

As the final choice, I had ISPConfig (which seems to be the best by people’s comments), and which is also quite widely used, and is easy to install onto Debian (at least the Perfect setup: Debian Etch says so), and DTC. I discarded Virtualmin (for the poor functionality of the GPLed version), RavenCore (for the lack of current descriptions and non-functioning demo), GNUPanel (which just isn’t ready yet), and SysCP (because ISPConfig seems better ).

As DTC has Debian packages (and will be easier to maintain/upgrade), I decided to try it first. I already have it installed (that’s easy, esp. if you first read the DTC Debian Express Setup). Later I might post my impressions from using DTC.

There’s a how-to on the topic at howtoforge.com.

Note, that for the suggested solution to work, NAT/firewall should be “transparent” for outgoing ssh connections.

One of the benefits, offered exclusively by the Windows Vista Ultimate (not even by the Windows Vista Business), is

running UNIX applications (via SUA, Subsystem for UNIX Applications) , which provides higher flexibility for Windows workstations.

Where is the world going?

And how soon will all the Windows users (not only Ultimate Users) benefit from the higher flexibility by running UNIX applications?

I’ve tried it already under Windows, but as my main OS is Debian, I can’t use it

You can sign up for updates on Linux version.

After reading the Google Chrome book, it is a long time waiting for it to be released for Linux….

Also, I’m looking forward for the plugins to enhance Chrome. Although it did import my settings/passwords(?!)/bookmarks from Firefox, but it has no Foxmarks, AdBlock and some other goodies I’m now used to on all the computers I regularly use.

There’s a Debian-Med project, aiming to

develop Debian into an operating system that is particularly well fit for the requirements for medical practice and research

Debian-Med has several web sites/pages: one at Debian.org (descriptive), and the actual project’s website at debian-med.alioth.debian.org. There’s also debian-med wiki (for developers).

As of nowadays, Debian-Med has released a number of Debian packages, which are grouped into respective Debian Med Tasks. The Biology-dev task, for example, contains MCL and libsbml packages (among many others).

Check this project out - you might find that the software you need is already available as Debian package.

This post was stimulated by Steffen’s comment.

There’s a troubleshooter for Ubuntu, which (expectedly) works quite the same for Debian (lenny in my case).

I’m installing libsbml to make the iBioSim tool work under Debian GNU/Linux. First thing I had to do was to make Sun’s java interpreter do all the java interpretation work instead of gcj: sudo update-java-alternatives -s java-6-sun (this assumes you do have java-6-sun installed).

Installing libsbml moved me one step further, now I’m getting another error from iBioSim:

Exception in thread "main" java.lang.NoClassDefFoundError: biomodelsim/BioSim
Caused by: java.lang.ClassNotFoundException: biomodelsim.BioSim
        at java.net.URLClassLoader$1.run(URLClassLoader.java:200)
        at java.security.AccessController.doPrivileged(Native Method)
        at java.net.URLClassLoader.findClass(URLClassLoader.java:188)
        at java.lang.ClassLoader.loadClass(ClassLoader.java:306)
        at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:276)
        at java.lang.ClassLoader.loadClass(ClassLoader.java:251)
        at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319)

This yet has to be fixed somehow.

If Zhou Xin’s blog becomes for any reason inaccessible (or moves to his own domain), below is the extract of the instructions from his post on how to install libsbml on Debian/Ubuntu Linux:
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For some reason, my IW 3 is now starting in Offline mode each time, despite my attempts to remove that checkbox every time.

Update: as suggested by Donny Kurnia (based on the recent post by Hobgoblin), the simplest and the most correct way to fix the problem is to go to about:config and set toolkit.networkmanager.disable to true.

Below you will find other (worse and obsolete) solutions.
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http://debian.org.ua/ and ftp://debian.org.ua/

What is on offer (mirrors):

• backports.org
• cygwin
• deb.opera.com
• debian - stable, testing, sid
• debian-archive (starting from 1.1!)
• debian-multimedia
• installation media (CDs/DVDs)
• debian-security
• even debian-volatile is here!

All this goodness is only 3 hops away from my DSL modem…. (ISP UkrTelecom)

Gone editing /etc/apt/sources.list

P.S. For non-ukrainian IPs, access might be slow/bandwidth-limited; for Ukrainian IPs, speed might be up to 100MBit/sec.

Update: some time after publishing this post, debian.org.ua was down for some reason. When it was up, it was serving me packages with a mere 3 kb/sec . I found that ftp2.debian.org.ua mirror is faster at the moment.

IEs4Linux provides a convenient package of Internet Explorer 5.0, 5.5, 6.0, and (partially supported) 7.0 for Linux.

It installed and runs fine under Debian Etch:

However, as you could notice from the screenshot above, CPU use is almost 100% while IE6Linux is running. It is better illustrated by the next screen:

I didn’t yet bother finding out what’s wrong, but that must have some kind of a fix, as running at 100% CPU on a laptop is … hot.

Debian HOW-TO: CPU power management / frequency scaling

Note, that under Gnome I only had to use a single system-wide utility to bind volume buttons to volume control. Under KDE things were a tad tougher.

First, you may want to look for kmilo (if you don’t have it yet). It has several plugins e.g. for ThinkPad and Vaio laptops, as well as “generic” plugin. I didn’t try this solution, though.

If you need more than kmilo can offer: keyTouch could help. keyTouch should be good also for non-laptop multimedia keyboards. However, this also wasn’t the solution I used.

If you want to know how to map your special keys to functions yourself - then read on.
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Earlier, I wrote about Universal boot CD , which is targeted primarily at the hardware testing/diagnosing.

If not hardware, but “only” software is malfunctioning - try SystemRescueCD, a Linux-based recovery CD/DVD/Flash stick (it all depends on how you burn/install the downloaded file - manuals and how-to’s are available).

As always, Disclaimer: I am in no way associated with SystemRescueCD, and gain no profit from this post. Any advice I give is provided AS IS, with no guarantees of fitness to your exact case.

Note: this post is based on the comment by Simon, who generously shared his experience.

Step-by-step:

• Download the compiled ffmpeg with libmp3lame support (direct download links: older version ffmpeg.with.lame and newer version ffmpeg.2007-10-28.with-libmp3lame-support).
• Rename the downloaded executable file to "ffmpeg" (no extension), upload it to the directory on your server (in this example /home/myusername/).
• Download libmp3lame.so.0.
• Upload libmp3lame.so.0 to the same directory where you placed ffmpeg in.
• Create a php file with the following code (remember to change the paths to your own, where you actually uploaded binaries in previous steps):
  PLAIN TEXT
  PHP:

  1. <?php
  2. exec("export LD_LIBRARY_PATH=/home/myusername/");
  3. echo passthru("/home/myusername/ffmpeg -formats");
  4. ?>

• If you access that PHP file with your browser, you should be able to see a list of formats which are supported by ffmpeg, and if you find "EA libmp3lame" somewhere in the output, then it means you now can Encode Audio in libmp3lame!
• If that doesn't work for you: LD_LIBRARY_PATH can be a protected variable in PHP (you can check for this by searching for the "safe_mode_protected_env_vars" value in phpinfo() output). The workaround here can be to write your commands to a file from php, then chmod that file with 0775 permissions (rwx-rx-rx), and run the file through exec(). In this way, PHP is not changing the LD_LIBRARY_PATH, but telling the server to run a file, which tells the server to change it. This method worked for the original author of these instructions.

For passing arguments to the PHP wrapper script - check out PHP's $argv variable (more on this here). If you decided to use shell-script as a wrapper for "export LD_LIBRARY_PATH", then using $1, $2 etc will allow you to pass parameters to the shell script, e.g. in the example below

you could pass "input file" as first argument, "parameters" as second and "output file" as third to make such a wrapper script work.

Update: there's now a much more recent post on how to install libmp3lame-enabled ffmpeg on shared linux hosting.

As Gabe pointed out in my post with compiled ffmpeg Linux binaries, there is a relatively simple method of adding libmp3lame.so.0 file to your shared hosting so that ffmpeg executable will see the library:

You can upload libmp4lame.so as well to the shared hosting site and when you call ffmpeg, call something to set an environment variable right before the call to ffmpeg i.e. in php I’d do exec(”export LD_LIBRARY_PATH=/path/to/lib/with/lame; /path/to/ffmpeg [ffmpegargs]”); That way you can use the uploaded lame. I hope that helps someone as I have been unable to find any info on how to use an uploaded lame. I’ve tried it and it works on godaddy.

Hope this helps.

Update: here's libmp3lame.so.0.0.0 (from slackware 2.4.x, lame-3.97). I have no idea if it'll work in your (shared hosting) environment; it is provided AS IS, use at your own risk etc. I can only state that the archived binary file at the moment of upload was indeed libmp3lame.so.0.0.0 from my elderly Slackware with 2.4.x kernel.

Recently, I installed Debian Etch 4.0r1 onto my laptop. However, after the first boot into plain console, computer was dead-frozen after some console usage. I rebooted using the Power button - this time to gdm; and again, after some keyboard input system was hanging dead.

I found the reason here. Basically, it's the PC speaker module (pcspr) not functioning correctly. I suspect this problem manifests itself only on some types of laptops. The solution is either to somehow reconfigure the pcspkr module, or just disable it. More on how to disable the module below.
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Today, setting up a relatively serious (in CPU resources needed) web-system, I ran into a weird problem of python scripts ending prematurely. After some investigation, it looked like any process which uses up more than 20 seconds of CPU time, is automatically killed. To verify this, I wrote an infinite loop in C,

compiled it and executed several times on the GoDaddy shared hosting server. I did observe the program running for the maximum of 20 seconds of CPU time, not a second more. Please note, that 20 seconds of CPU time can be much more of "real" time, if the script isn't using 100% of CPU, which often the case for shared hosting. Thus if you have in your php.ini max_execution_time set to, say, 60 seconds, your php script may actually execute as long as one minute; but I'm pretty sure that if your script has lots of CPU-intensive procedures, then as soon as it uses 20 seconds of CPU time, it will be terminated (however, this statement still needs checking - anyone?).

To verify, I also created a cron job with the same file. It ran for 30 seconds CPU time.

Strangely, this behaviour is not documented anywhere.

This limit may also explain a number of other problems, if you have heavy web-applications: they just might be killed before they are finished, causing errors.

I do understand the reason for this limitation, and am sure similar limitations exist in other shared hosting environments. The only important thing here is that this limit should have been documented and even put upfront somewhere in the hosting plans descriptions.

I also wonder if the limit is the same for all godaddy shared hosting plans, or if it differs. 20 seconds when executed from PHP, and 30 seconds when executed as a cron job were observed on the Deluxe Linux Hosting plan.

Extensions, additions and comments are welcome.