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> <channel><title>Autarchy of the Private Cave &#187; visualization</title> <atom:link href="https://bogdan.org.ua/tags/visualization/feed" rel="self" type="application/rss+xml" /><link>https://bogdan.org.ua</link> <description>Tiny bits of bioinformatics, [web-]programming etc</description> <lastBuildDate>Wed, 28 Dec 2022 16:09:04 +0000</lastBuildDate> <language>en-US</language> <sy:updatePeriod>hourly</sy:updatePeriod> <sy:updateFrequency>1</sy:updateFrequency> <generator>https://wordpress.org/?v=3.8.27</generator> <item><title>The Visualized Crisis of Credit</title><link>https://bogdan.org.ua/2009/02/26/the-visualized-crisis-of-credit.html</link> <comments>https://bogdan.org.ua/2009/02/26/the-visualized-crisis-of-credit.html#comments</comments> <pubDate>Thu, 26 Feb 2009 10:41:23 +0000</pubDate> <dc:creator><![CDATA[Bogdan]]></dc:creator> <category><![CDATA[Misc]]></category> <category><![CDATA[Society]]></category> <category><![CDATA[Welfare]]></category> <category><![CDATA[credit]]></category> <category><![CDATA[crisis]]></category> <category><![CDATA[video]]></category> <category><![CDATA[visualization]]></category> <guid
isPermaLink="false">http://bogdan.org.ua/?p=614</guid> <description><![CDATA[Everybody already knows that, but this visualization is good: The Crisis of Credit Visualized by Jonathan Jarvis.]]></description> <content:encoded><![CDATA[<p>Everybody already knows that, but this visualization is good:</p><p><object
width="400" height="225"><param
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name="movie" value="http://vimeo.com/moogaloop.swf?clip_id=3261363&amp;server=vimeo.com&amp;show_title=1&amp;show_byline=1&amp;show_portrait=0&amp;color=&amp;fullscreen=1" /><embed
src="http://vimeo.com/moogaloop.swf?clip_id=3261363&amp;server=vimeo.com&amp;show_title=1&amp;show_byline=1&amp;show_portrait=0&amp;color=&amp;fullscreen=1" type="application/x-shockwave-flash" allowfullscreen="true" allowscriptaccess="always" width="400" height="225"></embed></object><br
/><a
href="http://vimeo.com/3261363">The Crisis of Credit Visualized</a> by <a
href="http://vimeo.com/jonathanjarvis">Jonathan Jarvis</a>.</p><p><a
class="a2a_button_citeulike" href="https://www.addtoany.com/add_to/citeulike?linkurl=https%3A%2F%2Fbogdan.org.ua%2F2009%2F02%2F26%2Fthe-visualized-crisis-of-credit.html&amp;linkname=The%20Visualized%20Crisis%20of%20Credit" title="CiteULike" rel="nofollow noopener" target="_blank"></a><a
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class="a2a_dd addtoany_share_save addtoany_share" href="https://www.addtoany.com/share#url=https%3A%2F%2Fbogdan.org.ua%2F2009%2F02%2F26%2Fthe-visualized-crisis-of-credit.html&#038;title=The%20Visualized%20Crisis%20of%20Credit" data-a2a-url="https://bogdan.org.ua/2009/02/26/the-visualized-crisis-of-credit.html" data-a2a-title="The Visualized Crisis of Credit"><img
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isPermaLink="false">http://bogdan.org.ua/?p=423</guid> <description><![CDATA[CLANS (CLuster ANalysis of Sequences). Found via Freelancing science: CLANS runs (PSI)BLAST on your sequences, all vs all, and clusters them in 2D or 3D according to their similarity. This method allows for rapid classification of huge datasets and has the advantage over, lets say, phylogenetic tree, that one can quickly assess results of the [&#8230;]]]></description> <content:encoded><![CDATA[<p><a
href="http://bioinfoserver.rsbs.anu.edu.au/programs/clans/" class="broken_link" rel="nofollow">CLANS</a> (CLuster ANalysis of Sequences).<br
/> <span
id="more-423"></span><br
/> Found via <a
href="http://freelancingscience.com/2008/01/22/clans-java-tool-for-cluster-analysis-of-sequences/">Freelancing science</a>:</p><blockquote><p>CLANS runs (PSI)BLAST on your sequences, all vs all, and clusters them in 2D or 3D according to their similarity. This method allows for rapid classification of huge datasets and has the advantage over, lets say, phylogenetic tree, that one can quickly assess results of the clustering in a visual way (I cannot imagine making any sense of looking at phylogenetic tree with 1500 branches, while the graphical output, as on the animation below, is pretty easy to read).</p></blockquote><div
align="center"><img
src="http://bogdan.org.ua/wp-content/uploads/2008/10/clansmicroanim.gif" alt="" title="animated 3D cluster" width="500" height="434" class="aligncenter size-full wp-image-424" /></div><p><a
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