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> <channel><title>Autarchy of the Private Cave &#187; stem cells</title> <atom:link href="https://bogdan.org.ua/tags/stem-cells/feed" rel="self" type="application/rss+xml" /><link>https://bogdan.org.ua</link> <description>Tiny bits of bioinformatics, [web-]programming etc</description> <lastBuildDate>Wed, 28 Dec 2022 16:09:04 +0000</lastBuildDate> <language>en-US</language> <sy:updatePeriod>hourly</sy:updatePeriod> <sy:updateFrequency>1</sy:updateFrequency> <generator>https://wordpress.org/?v=3.8.27</generator> <item><title>Amazonia! 6462 human microarray datasets</title><link>https://bogdan.org.ua/2011/03/06/amazonia-6462-human-microarray-datasets.html</link> <comments>https://bogdan.org.ua/2011/03/06/amazonia-6462-human-microarray-datasets.html#comments</comments> <pubDate>Sun, 06 Mar 2011 19:18:51 +0000</pubDate> <dc:creator><![CDATA[Bogdan]]></dc:creator> <category><![CDATA[Bioinformatics]]></category> <category><![CDATA[Links]]></category> <category><![CDATA[Science]]></category> <category><![CDATA[amazonia]]></category> <category><![CDATA[data]]></category> <category><![CDATA[expression]]></category> <category><![CDATA[microarray]]></category> <category><![CDATA[stem cells]]></category> <guid
isPermaLink="false">http://bogdan.org.ua/?p=1460</guid> <description><![CDATA[Amazonia! &#8211; explore the jungle of microarray results Paradoxically, the tremendous downpour of microarray results prevents a simple use of expression data. Therefore, we propose a thematic entry to public transcriptomes: you may for instance query a gene on a &#8220;Stem Cells page&#8221;, where you will see the expression of your favorite gene across selected [&#8230;]]]></description> <content:encoded><![CDATA[<p><a
href="http://amazonia.transcriptome.eu/"><img
src="http://bogdan.org.ua/wp-content/uploads/2011/03/AmaZoniaLogo.png" alt="Amazonia!" title="Amazonia!" width="357" height="100" class="alignleft size-full wp-image-1463" /></a><a
href="http://amazonia.transcriptome.eu/">Amazonia! &#8211; explore the jungle of microarray results</a></p><blockquote><p>Paradoxically, the tremendous downpour of microarray results prevents a simple use of expression data. Therefore, we propose a thematic entry to public transcriptomes: you may for instance query a gene on a &#8220;Stem Cells page&#8221;, where you will see the expression of your favorite gene across selected microarray experiments related to stem cell biology. This selection of samples can be customized at will among the 6462 samples currently present in the database.</p></blockquote><blockquote><p>Every transcriptome study results in the identification of lists of genes relevant to a given biological condition. In order to include this valuable information in any new query in the Amazonia! database, we indicate for each gene in which lists it is included. This is a straightforward and efficient way to synthesize hundreds of microarray publications.</p><p>A special feature of Amazonia! is the field of human stem cells, notably embryonic stem cells.</p></blockquote><p><a
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