Autarchy of the Private Cave » eukaryotic https://bogdan.org.ua Tiny bits of bioinformatics, [web-]programming etc Wed, 28 Dec 2022 16:09:04 +0000 en-US hourly 1 https://wordpress.org/?v=3.8.27 COTRASIF: conservation-aided transcription factor binding site finderhttps://bogdan.org.ua/2008/05/20/cotrasif-conservation-aided-transcription-factor-bindin-site-finder.html https://bogdan.org.ua/2008/05/20/cotrasif-conservation-aided-transcription-factor-bindin-site-finder.html#comments Tue, 20 May 2008 17:33:47 +0000 http://bogdan.org.ua/?p=295 With this post, I’m finally announcing the opening of the (mostly) functional COTRASIF web-tool, created for the genome-wide identification of promoter regulatory sequences (transcription factor binding sits, TFBS). You can learn more from the About and Help pages. For an example of use, see the Supplement page (article is currently being prepared; as soon as it’s ready, I’ll make it available).

If you are interested – have a look at the News page, where there is information on joining COTRASIF Google group. For non-public enquiries, please use my contact page.

Note: the problem of identifying eukaryotic transcription factor binding sites stays acute for many years in a row – see e.g. the most recent Eukaryotic transcription factor binding sites – modelling and integrative search methods.

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